Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTATATGCCAGGTG
(((((((((.....(((((...&)))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001297642
GeneSymbolC1RL
Binding site2068,2083
Score0.923
Seed1
Au0.632
Energy-18.0
Binding len15
Me-13.498
Phylopstem-0.228
Phylopflank1.463
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure