Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCAGAAGCCAGGTG
(((((((......(((((....&)))))...))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001297642
GeneSymbolC1RL
Binding site2390,2406
Score0.846
Seed1
Au0.441
Energy-17.4
Binding len16
Me-16.011
Phylopstem0.5991021428571427
Phylopflank0.607484097375
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure