Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTACCTGGAAGTATAAACTGACAAACCAGCGGGCCCTGCGGA
(((((((((((((((((((((&)))))))...................)))).))))...)))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047424511
GeneSymbolPOMGNT1
Binding site498,543
Score0.846
Seed1
Au0.441
Energy-19.8
Binding len45
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings38
Pairings in 3prime end8
PositionCDS
2D Structure