Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCACCTACAAGGGCCAGTGG
(((((((.((((..(((((.((&))))))).))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001297662
GeneSymbolTTC39A
Binding site1169,1189
Score0.846
Seed1
Au0.441
Energy-23.3
Binding len20
Me-8.397
Phylopstem1.9037838571428571
Phylopflank3.8554612750000006
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure