Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCTCAGCAAGGAGAACTGCTGGTC
.(((((((((((.((((((((.&)))))))).))))).....)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001297662
GeneSymbolTTC39A
Binding site1213,1239
Score1.0
Seed1
Au0.441
Energy-23.0
Binding len26
Me-5.082
Phylopstem4.36758088125
Phylopflank3.4791476975
Longest consecutive pairings8
Position of longest consecutive pairings18
Pairings in 3prime end7
PositionCDS
2D Structure