Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGAAGAGATGCTGGAGAAAGGCCCAGAGAACGAGTACTCAGTGG
(((((((((.(((((((((...&.)))))))))..))))...))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001297666
GeneSymbolTTC39A
Binding site469,514
Score0.923
Seed1
Au0.529
Energy-24.2
Binding len25
Me-5.18
Phylopstem0.023676577777777787
Phylopflank0.1307818325
Longest consecutive pairings9
Position of longest consecutive pairings15
Pairings in 3prime end5
PositionCDS
2D Structure