Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGCTGGAGTGCAGTGG
((((((((((..(((((((...&)))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001297698
GeneSymbolNANOG
Binding site1348,1369
Score0.846
Seed1
Au0.353
Energy-27.2
Binding len21
Me-10.109
Phylopstem-0.20076111818181824
Phylopflank-0.27732194
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end5
Position3UTR
2D Structure