Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGATTGGGAGGCTTTGCTTATTTTTTAAAAACTATTGAGGTAAAGGGTTA
.((((((((((((.(((((..&.)))))))))..))..........................)))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001297698
GeneSymbolNANOG
Binding site1761,1811
Score0.846
Seed1
Au0.735
Energy-20.7
Binding len47
Me-4.65
Phylopstem0.08382866
Phylopflank0.06077634999999995
Longest consecutive pairings9
Position of longest consecutive pairings37
Pairings in 3prime end5
Position3UTR
2D Structure