Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCGAGGCACTGCTACGCCAGCAGCTGCC
..((((((((((.((((.(((&.)))..)))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001330466
GeneSymbolSLC8B1
Binding site2979,3009
Score0.923
Seed1
Au0.324
Energy-22.3
Binding len22
Me-6.246
Phylopstem-0.4547853272727273
Phylopflank-0.6077013625000001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure