Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGGAGCCGCCAGCTGTT
..((((((((((((....(((&)))..)))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001330466
GeneSymbolSLC8B1
Binding site670,689
Score0.846
Seed1
Au0.412
Energy-21.7
Binding len19
Me-5.925
Phylopstem-0.5921925000000001
Phylopflank-0.5662068150000001
Longest consecutive pairings6
Position of longest consecutive pairings8
Pairings in 3prime end4
Position5UTR
2D Structure