Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCGCAGGGAGCTGGAACAGGTGGCTCAGAAGGGGCGAGCCAGA
..(((((((((((((((((...&.)))))))))))...)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001297703
GeneSymbolUSHBP1
Binding site1803,1849
Score1.0
Seed1
Au0.368
Energy-26.5
Binding len22
Me-4.957
Phylopstem0.388903375
Phylopflank1.1611025449999999
Longest consecutive pairings11
Position of longest consecutive pairings10
Pairings in 3prime end5
PositionCDS
2D Structure