Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCGGGGCACCAGGGAAGGATGGGTACGACGGACTGCCGGGGCCCAAGGGGGAGCCAGG
..(((((((((((.(((((...&.))))).))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001347619
GeneSymbolC1QC
Binding site387,449
Score0.923
Seed1
Au0.309
Energy-29.2
Binding len19
Me-5.814
Phylopstem1.7247406363636364
Phylopflank1.4766859875
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure