Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAGTTCCCGTTGTATCCAGA
..((((.((((((((..(((((&)))))..)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001297717
GeneSymbolC1orf43
Binding site948,968
Score0.846
Seed0
Au0.544
Energy-15.7
Binding len20
Me-6.734
Phylopstem4.699848612499999
Phylopflank3.5071714637499998
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure