Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTCTCCGGGGTGAATGTCGTGCTGGTGATGGCCTACGGGAGCCTGGTGT
(((((((((((...(((((...&.))))).))))))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001297717
GeneSymbolC1orf43
Binding site204,253
Score0.846
Seed1
Au0.529
Energy-22.9
Binding len20
Me-9.43
Phylopstem0.32612998333333326
Phylopflank-0.05230243000000001
Longest consecutive pairings7
Position of longest consecutive pairings6
Pairings in 3prime end5
PositionCDS
2D Structure