Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTCTCCGGGGTGAATGTCGTGCTGGTGATGGCCTACGGGAGCCTGGTGT
(((((((((((...(((((...&.))))).))))))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001297723
GeneSymbolC1orf43
Binding site204,253
Score0.923
Seed1
Au0.529
Energy-22.9
Binding len20
Me-9.43
Phylopstem0.20751600000000006
Phylopflank0.15346629499999995
Longest consecutive pairings7
Position of longest consecutive pairings6
Pairings in 3prime end5
PositionCDS
2D Structure