Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATAATGTTGGCCGCCAGGTG
(((((((...((((((......&.))))))...))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001297738
GeneSymbolTBCA
Binding site996,1018
Score0.923
Seed1
Au0.529
Energy-17.5
Binding len18
Me-8.55
Phylopstem-0.05792528571428569
Phylopflank0.26927177499999994
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure