Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTGCCCAGAAGGCAGCAGAGG
..((.(((.((((((((((((.&)))))))))))).)))..)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001297764
GeneSymbolUSH1C
Binding site1085,1106
Score1.0
Seed0
Au0.529
Energy-23.2
Binding len21
Me-10.132
Phylopstem3.9956002499999994
Phylopflank4.200792975000001
Longest consecutive pairings12
Position of longest consecutive pairings9
Pairings in 3prime end7
PositionCDS
2D Structure