Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGATTGGAGATAGGGG
...(((((...((.(((((((&)))))))..))...))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001297764
GeneSymbolUSH1C
Binding site855,875
Score0.923
Seed0
Au0.426
Energy-23.0
Binding len20
Me-12.495
Phylopstem0.7775875714285715
Phylopflank2.0603615062500005
Longest consecutive pairings7
Position of longest consecutive pairings13
Pairings in 3prime end7
PositionCDS
2D Structure