Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGCCTATCGCAGCTGA
...((((((((((.((.(((.&))).))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047424550
GeneSymbolMSS51
Binding site5439,5458
Score0.897
Seed0
Au0.574
Energy-22.1
Binding len19
Me-7.371
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure