Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCGTCTGTGAGGCCAA
...((((.(((((((((((...&))))))).))))..)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001297776
GeneSymbolRIMKLB
Binding site1180,1199
Score0.872
Seed0
Au0.529
Energy-16.6
Binding len19
Me-8.828
Phylopstem5.194728666666667
Phylopflank6.267744262500001
Longest consecutive pairings7
Position of longest consecutive pairings12
Pairings in 3prime end5
PositionCDS
2D Structure