Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCACATTGGCAATGTCAGAGAAGGTGCGGACCCGGCTGGAGGAGCTGGATGA
(((((((((((((((((((...&.))))))..))))))))))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001300743
GeneSymbolVPS35L
Binding site472,527
Score0.846
Seed1
Au0.412
Energy-26.1
Binding len24
Me-3.938
Phylopstem3.097578172727273
Phylopflank5.4549527399999995
Longest consecutive pairings11
Position of longest consecutive pairings4
Pairings in 3prime end5
PositionCDS
2D Structure