Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCTCAGAACCCTGGTGCTTTATTTTTGTTTTAATCTTTTGTTGCCAGTGA
(((((((.((.((((((((((.&))))))))))....))............................))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001300744
GeneSymbolSEC31A
Binding site3429,3481
Score0.846
Seed1
Au0.706
Energy-22.1
Binding len52
Me-9.076
Phylopstem3.4511194000000005
Phylopflank4.54462550125
Longest consecutive pairings10
Position of longest consecutive pairings42
Pairings in 3prime end7
Position3UTR
2D Structure