Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCACAATAGCTAGGA
.((((((.((...((((((...&))))))...)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001300785
GeneSymbolMTTP
Binding site3594,3612
Score0.846
Seed1
Au0.632
Energy-15.3
Binding len18
Me-13.568
Phylopstem-0.42585733333333337
Phylopflank0.11087098174999994
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure