Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGATCAAAGTCCGGTGGTTTCGGAATGACCAGGAGGAGACAGCCGGTGT
(((((((((((((((((((...&))))))).............................)))))....))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001300790
GeneSymbolHLA-DQB2
Binding site515,568
Score0.923
Seed1
Au0.426
Energy-24.9
Binding len53
Me-3.938
Phylopstem1.9399410115384617
Phylopflank2.09295986375
Longest consecutive pairings7
Position of longest consecutive pairings46
Pairings in 3prime end5
PositionCDS
2D Structure