Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCAGAATTCCTAGCTGCCTGTGT
(((.(((..((((((((((((.&)))))))))).....))..))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001300790
GeneSymbolHLA-DQB2
Binding site914,941
Score0.846
Seed0
Au0.382
Energy-24.7
Binding len27
Me-10.34
Phylopstem-0.8101338294117647
Phylopflank0.2685404437500001
Longest consecutive pairings10
Position of longest consecutive pairings17
Pairings in 3prime end7
Position3UTR
2D Structure