Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGGAGGTGGAGGTTGTGG
(((.(.(((((((((((((...&)))))))))..)))).).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001300800
GeneSymbolNAA40
Binding site3326,3348
Score0.846
Seed0
Au0.412
Energy-22.9
Binding len22
Me-8.871
Phylopstem-0.20670599999999997
Phylopflank-0.044742544999999995
Longest consecutive pairings9
Position of longest consecutive pairings13
Pairings in 3prime end5
Position3UTR
2D Structure