Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCTCTGGCTGCCAGGA
.(((((((..((..((......&))..))..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001300802
GeneSymbolRPS6KA4
Binding site995,1011
Score0.846
Seed1
Au0.382
Energy-16.6
Binding len16
Me-8.238
Phylopstem2.5754352857142853
Phylopflank3.156752613625
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure