Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCGCAGGGGGCAGCCAGG
..((((((.((((((((((...&))).))))))).)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001300804
GeneSymbolMDFI
Binding site1548,1567
Score0.827
Seed1
Au0.309
Energy-23.3
Binding len19
Me-6.013
Phylopstem-0.4112683627272727
Phylopflank-0.05831561187500006
Longest consecutive pairings7
Position of longest consecutive pairings8
Pairings in 3prime end5
Position3UTR
2D Structure