Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCTCAGGAAGCAGCCT
....((((.((((((((((...&)))))))))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001300808
GeneSymbolBATF2
Binding site804,820
Score0.846
Seed0
Au0.382
Energy-21.0
Binding len16
Me-10.603
Phylopstem0.27095260000000004
Phylopflank-0.13260929649999997
Longest consecutive pairings10
Position of longest consecutive pairings6
Pairings in 3prime end5
Position3UTR
2D Structure