Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTGCCCAGGAGTTGGGATGGTATTCAAGGTCCAGTT
.((((((((((((((((((((.&))))))))))...))))...........).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001300810
GeneSymbolKRT85
Binding site186,222
Score0.923
Seed1
Au0.485
Energy-21.4
Binding len36
Me-3.793
Phylopstem1.0583672342857147
Phylopflank0.2912694974999999
Longest consecutive pairings10
Position of longest consecutive pairings26
Pairings in 3prime end7
Position5UTR
2D Structure