Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCAGGAAGCCAGGAGTGTGGGAATCAGGTGGGGTGCCAGGA
.((((((((...((.(.(((((&.)))))).))...)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001300814
GeneSymbolKRT78
Binding site2042,2086
Score0.846
Seed1
Au0.426
Energy-19.1
Binding len22
Me-11.943
Phylopstem4.0850115
Phylopflank1.196282654125
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure