Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCTGGA
..(((((((((((((((((((.&))).))))))))))).................))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001300815
GeneSymbolCIRBP
Binding site652,690
Score0.846
Seed1
Au0.368
Energy-23.2
Binding len38
Me-4.957
Phylopstem-0.20196276216216216
Phylopflank-0.38330983375000005
Longest consecutive pairings11
Position of longest consecutive pairings23
Pairings in 3prime end7
Position3UTR
2D Structure