Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATGCCAGGTT
(((((((((.............&))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001300824
GeneSymbolPRDM5
Binding site800,810
Score0.923
Seed1
Au0.412
Energy-15.3
Binding len10
Me-14.466
Phylopstem-0.46017304444444446
Phylopflank-0.1744093985
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure