Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACAATTGACCGTGAACAACTGTGCCAGA
..((((((((((((((((....&))))).)))............)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001300828
GeneSymbolPCDH18
Binding site674,704
Score0.846
Seed1
Au0.574
Energy-16.3
Binding len30
Me-4.957
Phylopstem0.00238785517241379
Phylopflank-0.23509842000000003
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure