Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCGCAGGAAGGGACCCTTGCCAGC
..((((((((((((((.((...&)).)))))))))......))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001300828
GeneSymbolPCDH18
Binding site3510,3534
Score0.846
Seed1
Au0.382
Energy-22.7
Binding len24
Me-4.957
Phylopstem2.2491999999999996
Phylopflank1.7532999999999999
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end4
PositionCDS
2D Structure