Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCACCCAGCATCATGAATCAACTTGGGAGGAGTCAA
...((((((((((((((((.((&)))))))).................)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001300834
GeneSymbolC1orf162
Binding site755,791
Score0.846
Seed0
Au0.632
Energy-21.4
Binding len36
Me-6.515
Phylopstem0.08811754545454546
Phylopflank0.18391577750000002
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure