Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCAGGGCGCTCAGGAAGGGGCTCAGG
..(((((((((((((((((...&.)))))))))))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001300836
GeneSymbolPLEKHJ1
Binding site719,746
Score0.923
Seed1
Au0.265
Energy-27.9
Binding len20
Me-4.957
Phylopstem3.567156105555555
Phylopflank3.294025425000001
Longest consecutive pairings14
Position of longest consecutive pairings5
Pairings in 3prime end5
PositionCDS
2D Structure