Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTACTGCTAGCTGACAGGAGTTGGCTGCT
..(((((((((((.(((((((&))))))).))).))...........)))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047424743
GeneSymbolC1orf112
Binding site2432,2464
Score0.846
Seed1
Au0.529
Energy-21.0
Binding len32
Me-5.814
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings25
Pairings in 3prime end7
PositionCDS
2D Structure