Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTGCCAGGTA
((((((((((............&)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001300845
GeneSymbolSLC35F3
Binding site2126,2137
Score0.923
Seed1
Au0.5
Energy-17.0
Binding len11
Me-13.224
Phylopstem0.6898016
Phylopflank0.38125846124999996
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure