Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCAGCTGCGGAAGGAGCCAC
...(((((((((((..(((.((&)).)))..))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001300888
GeneSymbolPBDC1
Binding site39,59
Score0.923
Seed0
Au0.382
Energy-22.0
Binding len20
Me-7.483
Phylopstem-0.34483939090909094
Phylopflank-0.5501233102027027
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure