Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCCACCCTGGAGGAGCTG
....(((((((((..((((.((&)).)))).))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001300891
GeneSymbolPRAMEF27
Binding site259,277
Score0.923
Seed0
Au0.412
Energy-20.7
Binding len18
Me-11.139
Phylopstem-0.07297419999999999
Phylopflank-0.4270437079999999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure