Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ATGTGGAAGGGAACAGAAATAAATAATGAGTGCCAGTGG
((((((((((((((((.((...&)).)))))))))...................))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001300898
GeneSymbolSCLT1
Binding site1566,1605
Score0.923
Seed1
Au0.647
Energy-22.1
Binding len39
Me-3.938
Phylopstem1.9087082000000002
Phylopflank1.74347155375
Longest consecutive pairings9
Position of longest consecutive pairings27
Pairings in 3prime end4
Position3UTR
2D Structure