Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTTACCCTGGGTCATGGAAGCCAGA
..((((((((..((((((((((&))))))).)))....))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001300906
GeneSymbolIBTK
Binding site996,1021
Score0.846
Seed1
Au0.574
Energy-21.9
Binding len25
Me-11.129
Phylopstem0.2155154936363637
Phylopflank0.37791853025
Longest consecutive pairings7
Position of longest consecutive pairings18
Pairings in 3prime end8
PositionCDS
2D Structure