Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTTTGCTCCTTGCCAGGTT
((((((((......((((((..&))))))....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001300917
GeneSymbolPRKACB
Binding site85,104
Score1.0
Seed1
Au0.574
Energy-17.2
Binding len19
Me-14.554
Phylopstem1.359055625
Phylopflank3.6555583037500012
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure