Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGGGGTGTGGCCAGGA
.((((((.((((.(.((((...&)))).).)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001300927
GeneSymbolPGPEP1
Binding site542,560
Score0.923
Seed1
Au0.382
Energy-19.2
Binding len18
Me-8.132
Phylopstem0.05886573500000003
Phylopflank-0.026374911
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure