Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGTGAACACAGGCATTAGTGGTCCAGGGTCCTGGCTTGGAGCCAGTGA
((((((((((...(((((....&.)))))...)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001300935
GeneSymbolNPSR1
Binding site1676,1728
Score0.846
Seed1
Au0.422
Energy-26.5
Binding len20
Me-11.398
Phylopstem0.05347853000000001
Phylopflank0.03469826152777775
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure