Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTACCCATATCACTGCCAGTT
.((((((.......(((((((.&))))))).......)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001300947
GeneSymbolCPSF6
Binding site3443,3464
Score0.846
Seed1
Au0.75
Energy-19.2
Binding len21
Me-16.723
Phylopstem0.4194123414285715
Phylopflank0.56084410975
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure