Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGAAAGGAGCTGGAGCTTCCTGCTCAGACCCACAACATTGGTCA
.((((((.(((((((((((((&)))))))..)).)))).))........................)))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001300958
GeneSymbolBSDC1
Binding site1457,1505
Score0.923
Seed1
Au0.456
Energy-25.0
Binding len48
Me-6.107
Phylopstem0.5971454125
Phylopflank0.4617602625
Longest consecutive pairings7
Position of longest consecutive pairings41
Pairings in 3prime end8
Position3UTR
2D Structure