Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGCTAGGGGCTGGA
..(((((((((..((((((...&))))))..))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001300967
GeneSymbolNPC1L1
Binding site497,515
Score0.846
Seed1
Au0.382
Energy-25.7
Binding len18
Me-9.593
Phylopstem4.956603169999999
Phylopflank2.7101590341249993
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure