Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTTTCCCGGGAAGAGGCTCTCAAGACTAGCCAGTGC
((((((((((((((((((.(((&))).))))))))).)............)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001300968
GeneSymbolCCDC181
Binding site254,290
Score1.0
Seed1
Au0.456
Energy-23.6
Binding len36
Me-3.938
Phylopstem2.1879578741935477
Phylopflank1.9205801356249999
Longest consecutive pairings9
Position of longest consecutive pairings23
Pairings in 3prime end7
Position5UTR
2D Structure